MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Lactobacillus johnsonii
19428wE2_CC3
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
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Genome Info
Taxon Description
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NCBI Genome Annotation:
contigs: 101
bases: 1,925,316 bps
CDS: 1,806
rRNA: 9
tRNA: 59
tmRNA: 1
Total number of protein coding genes annotated/found:
1,747
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Items 1 - 20
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Molecule ^
PID/GenBank ID *
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5026|JADGKX010000001.1
MBF0770648.1
Genome Viewer
NA
AA
93/31
1031-1123
putative holin-like toxin
SEQF5026|JADGKX010000001.1
MBF0770649.1
Genome Viewer
NA
AA
414/138
1722-1309
YjdF family protein
SEQF5026|JADGKX010000001.1
MBF0770650.1
Genome Viewer
NA
AA
534/178
1933-2466
TetR/AcrR family transcriptional regulator
SEQF5026|JADGKX010000001.1
MBF0770651.1
Genome Viewer
NA
AA
597/199
2468-3064
NAD(P)H-dependent oxidoreductase
SEQF5026|JADGKX010000001.1
MBF0770652.1
Genome Viewer
NA
AA
978/326
3151-4128
helix-turn-helix transcriptional regulator
SEQF5026|JADGKX010000001.1
MBF0770653.1
Genome Viewer
NA
AA
93/31
4302-4394
putative holin-like toxin
SEQF5026|JADGKX010000001.1
MBF0770654.1
Genome Viewer
NA
AA
510/170
5062-4553
YbhB/YbcL family Raf kinase inhibitor-like protein
SEQF5026|JADGKX010000001.1
MBF0770655.1
Genome Viewer
NA
AA
633/211
5855-5223
TetR/AcrR family transcriptional regulator
SEQF5026|JADGKX010000001.1
MBF0770656.1
Genome Viewer
NA
AA
393/131
6062-6454
hypothetical protein
SEQF5026|JADGKX010000001.1
MBF0770657.1
Genome Viewer
NA
AA
336/112
8101-8436
helix-turn-helix transcriptional regulator
SEQF5026|JADGKX010000001.1
MBF0770658.1
Genome Viewer
NA
AA
1554/518
10234-8681
glutamine-hydrolyzing GMP synthase
SEQF5026|JADGKX010000001.1
MBF0770659.1
Genome Viewer
NA
AA
777/259
10421-11197
beta-carotene 15%2C15'-monooxygenase
SEQF5026|JADGKX010000001.1
MBF0770660.1
Genome Viewer
NA
AA
579/193
11411-11989
xanthine phosphoribosyltransferase
SEQF5026|JADGKX010000001.1
MBF0770661.1
Genome Viewer
NA
AA
1329/443
11990-13318
purine permease
SEQF5026|JADGKX010000001.1
MBF0770662.1
Genome Viewer
NA
AA
1266/422
14675-13410
UDP-N-acetylglucosamine 1-carboxyvinyltransferase
SEQF5026|JADGKX010000001.1
MBF0770663.1
Genome Viewer
NA
AA
1623/541
16429-14807
CTP synthase
SEQF5026|JADGKX010000001.1
MBF0770664.1
Genome Viewer
NA
AA
543/181
17101-16559
DNA-directed RNA polymerase subunit delta
SEQF5026|JADGKX010000001.1
MBF0770665.1
Genome Viewer
NA
AA
420/140
17569-17150
DUF1934 domain-containing protein
SEQF5026|JADGKX010000001.1
MBF0770666.1
Genome Viewer
NA
AA
1365/455
17682-19046
HD domain-containing protein
SEQF5026|JADGKX010000001.1
MBF0770667.1
Genome Viewer
NA
AA
1617/539
20700-19084
alpha-glucosidase
Items 1 - 20
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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